Technical replicate [1191]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP7_32	Illumina	NextSeq 550	No	Aug. 16, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP7_32  STRT2_FP7_32_canine_mapped.bam STRT2_FP7_32_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP7_32  STRT2_FP7_32_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP7_32 — — 83,811 — 1,794,493 75.40 — —

Technical replicate [1567]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP14_32	Illumina	NextSeq 550	No	May 2, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP14_32  SDID_001949_STRT2_FP14_32_canine_mapped.bam SDID_001948_STRT2_FP14_32_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP14_32  SDID_001948_STRT2_FP14_32_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP14_32 — — 134,283 — 2,351,518 64.60 — —

Technical replicate [1382]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP7_41	Illumina	NextSeq 550	No	Aug. 16, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP7_41  STRT2_FP7_41_canine_mapped.bam STRT2_FP7_41_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP7_41  STRT2_FP7_41_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP7_41 — — 68,067 — 1,454,991 75.60 — —