Technical replicate [1141]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP6_10	Illumina	NextSeq 550	No	June 15, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP6_10  STRT2_FP6_10_canine_mapped.bam STRT2_FP6_10_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP6_10  STRT2_FP6_10_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP6_10 — — 96,837 — 904,890 54.50 — —

Technical replicate [1042]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP3_33	Illumina	NextSeq 550	No	Dec. 12, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP3_33  STRT2_FP3_33_canine_mapped.bam STRT2_FP3_33_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP3_33  STRT2_FP3_33_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP3_33 — — 310,817 — 4,099,033 70.10 — —

Technical replicate [1379]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP6_41	Illumina	NextSeq 550	No	June 15, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP6_41  STRT2_FP6_41_canine_mapped.bam STRT2_FP6_41_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP6_41  STRT2_FP6_41_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP6_41 — — 1,625 — 30,884 19.20 — —