| Sample ID: | 145 |
|---|---|
| Anatomical region: | head |
| Organ system: | eye |
| Term: | optic II nerve |
| Sub-term: | optic II nerve |
| Sampling: | 2017-02-16 / provided by Lohi lab |
| Transport media: | RNAlater |
| Additional info: | Dissection date 16.2.2017 |
| From subject: | SLK1048 |
|---|---|
| Breed (variant): | Finnish Lapphund |
| Sex: | Female |
| Age: | 6y 6m |
| Steril./Castr.: | Yes |
| Reports: | Necropsy report Clinical test results |
| WGS ID: | SLK1048A1, BioProject PRJNA907518, SRR22520749 |
| Additional info: | — |
| Study: | Study of gene expression across dog tissues |
|---|---|
| Description: | This project will generate the critical resources to better utilize various canine models to advance both dog and human health. |
| Status / Visibility: | Submitted / Public |
| Publication: | The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. Nat. Commun. 2024, 15(1):9082 (PMID: 39433728) |
| Other IDs: | PRJNA907518 |
| Additional info: | — |
| RNA extraction | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments |
| 13 | 2017-04-03 | SLK1048 145 | 30.0 (QUBIT) | 24 mg | 30 | 900.0 | QIAGEN RNeasy Mini Kit | 6.90 | 1.957 | 1.619 | — |
|
Applied assays
This sample was not sequenced yet.
|
|||||||||||
| RNA extraction | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments |
| 483 | 2017-11-21 | SLK1048 145(22.11.) | 95.0 (QUBIT) | 13 mg | 20 | 1900.0 | Not specified | 6.90 | 1.992 | 1.693 | — |
|
Applied assays
This sample was not sequenced yet.
|
|||||||||||