Technical replicate [1556]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP14_44	Illumina	NextSeq 550	No	May 2, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP14_44  SDID_001973_STRT2_FP14_44_canine_mapped.bam SDID_001972_STRT2_FP14_44_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP14_44  SDID_001972_STRT2_FP14_44_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP14_44 — — 109,957 — 1,440,229 65.60 — —

Technical replicate [1169]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP7_44	Illumina	NextSeq 550	No	Aug. 16, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP7_44  STRT2_FP7_44_canine_mapped.bam STRT2_FP7_44_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP7_44  STRT2_FP7_44_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP7_44 — — 56,686 — 681,300 70.30 — —

Technical replicate [1409]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP9_42	Illumina	NextSeq 550	No	Oct. 12, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP9_42  STRT2_FP9_42_canine_mapped.fq.gz — CanFam3.1 — 3.0 — STRT2_FP9_42  STRT2_FP9_42_canine_mapped.bam STRT2_FP9_42_canine_mapped.fq.gz CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP9_42 — — 297,744 — 1,104,432 59.30 — —