Technical replicate [1517]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP13_39	Illumina	NextSeq 550	No	Aug. 14, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP13_39  SDID_001873_STRT2_FP13_39_canine_mapped.bam SDID_001872_STRT2_FP13_39_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP13_39  SDID_001872_STRT2_FP13_39_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP13_39 — — 156,744 — 8,159 4.30 — —

Technical replicate [1689]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP16_27	Illumina	NextSeq 550	No	Dec. 23, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP16_27  SDID_002120_STRT2_FP16_27_canine_mapped.bam SDID_002119_STRT2_FP16_27_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP16_27  SDID_002119_STRT2_FP16_27_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP16_27 — — — — 24,615 5.70 — —

Technical replicate [1685]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP16_43	Illumina	NextSeq 550	No	Dec. 23, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP16_43  SDID_002138_STRT2_FP16_43_canine_mapped.bam SDID_002137_STRT2_FP16_43_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP16_43  SDID_002137_STRT2_FP16_43_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP16_43 — — — — 29,682 6.30 — —