Sample ID: | 3840 |
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Anatomical region: | abdominal cavity |
Organ system: | alimentary system |
Term: | colon |
Sub-term: | colon (mucosa) |
Sampling: | 2017-11-01 / provided by Lohi lab |
Transport media: | Liquid nitrogen |
Additional info: | — |
From subject: | AM398 |
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Breed (variant): | Alaskan Malamute |
Sex: | Female |
Age: | 7y 1m |
Steril./Castr.: | No |
Reports: | Necropsy report |
WGS ID: | — |
Additional info: | — |
Study: | Study of gene expression across dog tissues |
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Description: | This project will generate the critical resources to better utilize various canine models to advance both dog and human health. |
Status / Visibility: | Submitted / Public |
Publication: | The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. Nat. Commun. 2024, 15(1):9082 (PMID: 39433728) |
Other IDs: | PRJNA907518 |
Additional info: | — |
RNA extraction | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
469 | 2018-01-22 | 3840 (23.1.2018) | 788.0 (QUBIT) | 2 mm3 | 30 | 15052.0 | QIAGEN RNeasy Mini Kit | 8.90 | 2.11 | 1.66 | — | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Applied assays
STRT2-seq
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