Sample ID: | 4189 |
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Anatomical region: | thoracic cavity |
Organ system: | cardiovascular system |
Term: | heart endocardium |
Sub-term: | aortic valve |
Sampling: | 2017-11-28 / provided by Lohi lab |
Transport media: | RNAlater |
Additional info: | — |
From subject: | CLK294 |
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Breed (variant): | Collie( smooth) |
Sex: | Male |
Age: | 4y 6m |
Steril./Castr.: | No |
Reports: | Necropsy report Clinical test results |
WGS ID: | — |
Additional info: | — |
Study: | Study of gene expression across dog tissues |
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Description: | This project will generate the critical resources to better utilize various canine models to advance both dog and human health. |
Status / Visibility: | Submitted / Public |
Publication: | The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. Nat. Commun. 2024, 15(1):9082 (PMID: 39433728) |
Other IDs: | PRJNA907518 |
Additional info: | — |
RNA extraction | |||||||||||
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ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments |
908 | 2020-02-26 | 4189 (TS26.2.2020) | 115.2 (QUBIT) | 2 mm3 | 25 | 2461.0 | QIAZOL + QIAGEN RNeasy Mini Kit | 8.00 | 1.95 | 1.58 | Tissue ruptor |
Applied assays
This sample was not sequenced yet.
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RNA extraction | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
426 | 2018-06-18 | 4189 (25.6.2018) | 103.0 (QUBIT) | 2 mm3 | 30 | 2416.0 | QIAZOL + QIAGEN RNeasy Mini Kit | 7.80 | 1.94 | 1.92 | Tissue ruptor | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Applied assays
STRT2-seq
|