| Sample ID: | 4619 |
|---|---|
| Anatomical region: | thoracic cavity |
| Organ system: | cardiovascular system |
| Term: | heart endocardium |
| Sub-term: | aortic valve |
| Sampling: | 2018-02-07 / provided by Lohi lab |
| Transport media: | RNAlater |
| Additional info: | Not all the tissues were collected from this dog. |
| From subject: | VEO010 |
|---|---|
| Breed (variant): | East-European Shepherd |
| Sex: | Female |
| Age: | 2y 10m |
| Steril./Castr.: | Not specified |
| Reports: | Necropsy report |
| WGS ID: | — |
| Additional info: | — |
| Study: | Study of gene expression across dog tissues |
|---|---|
| Description: | This project will generate the critical resources to better utilize various canine models to advance both dog and human health. |
| Status / Visibility: | Submitted / Public |
| Publication: | The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. Nat. Commun. 2024, 15(1):9082 (PMID: 39433728) |
| Other IDs: | PRJNA907518 |
| Additional info: | — |
| RNA extraction | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| 639 | 2018-06-25 | 4619 (27.6.218) | 151.0 (QUBIT) | 2 mm3 | 30 | 3480.0 | QIAZOL + QIAGEN RNeasy Mini Kit | 8.90 | 1.98 | 1.83 | — | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Applied assays
STRT2-seq
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