Technical replicate [1504]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP13_45	Illumina	NextSeq 550	No	Aug. 14, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP13_45  SDID_001887_STRT2_FP13_45_canine_mapped.bam SDID_001886_STRT2_FP13_45_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP13_45  SDID_001886_STRT2_FP13_45_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP13_45 — — 135,885 — 6,027 3.60 — —

Technical replicate [1690]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP16_26	Illumina	NextSeq 550	No	Dec. 23, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP16_26  SDID_002117_STRT2_FP16_26_canine_mapped.fq.gz — CanFam3.1 — 3.0 — STRT2_FP16_26  SDID_002118_STRT2_FP16_26_canine_mapped.bam SDID_002117_STRT2_FP16_26_canine_mapped.fq.gz CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP16_26 — — — — 4,712,842 75.40 — —

Technical replicate [1668]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP16_42	Illumina	NextSeq 550	No	Dec. 23, 2019	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP16_42  SDID_002136_STRT2_FP16_42_canine_mapped.bam SDID_002135_STRT2_FP16_42_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP16_42  SDID_002135_STRT2_FP16_42_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP16_42 — — — — 4,032,850 75.20 — —