| Sample ID: | 625 |
|---|---|
| Anatomical region: | head |
| Organ system: | eye |
| Term: | retina |
| Sub-term: | retina |
| Sampling: | 2017-03-06 / provided by Lohi lab |
| Transport media: | RNAlater |
| Additional info: | List of tissues was modified from previous necropsy. |
| From subject: | JPK344 |
|---|---|
| Breed (variant): | Swedish Elkhound |
| Sex: | Female |
| Age: | 3y 5m |
| Steril./Castr.: | No |
| Reports: | Necropsy report Clinical test results |
| WGS ID: | JPK344A1, BioProject PRJNA907518, SRR22520748 |
| Additional info: | Two generalized epileptic seizures. |
| Study: | Study of gene expression across dog tissues |
|---|---|
| Description: | This project will generate the critical resources to better utilize various canine models to advance both dog and human health. |
| Status / Visibility: | Submitted / Public |
| Publication: | The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. Nat. Commun. 2024, 15(1):9082 (PMID: 39433728) |
| Other IDs: | PRJNA907518 |
| Additional info: | — |
| RNA extraction | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| ID | Date | Bioanalizer ID | Stock Conc. (ng/µl) |
Tissue ammount | Sample volume | RNA amount (ng) |
Extraction method | RIN | Ratio A260/A280 |
Ratio A260/A230 |
Comments | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| 117 | 2018-11-12 | 625 (15.11.2018) | 736.0 (ND) | 2 mm3 | 42 | 30914.0 | QIAZOL + QIAGEN RNeasy Mini Kit | 9.00 | 2.11 | 1.79 | Pooled tissues 625&626 because the pieces were too little. Ceramic bead homogenization. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Applied assays
CAGE-seq
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