Technical replicate [981]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP2_9	Illumina	NextSeq 550	No	Nov. 27, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP2_9  STRT2_FP2_9_canine_mapped.bam STRT2_FP2_9_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP2_9  STRT2_FP2_9_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP2_9 — — 78,927 — 2,180,681 68.80 — —

Technical replicate [1068]
Other ID	Platform	Instrument	Paired end	Seq. date	Strand mode	Max. read length	Chemistry version	Laboratory	Comments
STRT2_FP4_6	Illumina	NextSeq 550	No	May 14, 2018	SR 1x75bp	75bp	NextSeq High Output	FuGU lab	Phi-X spike in added to each STRT2 library for sequencing (20%).
Sequencing information Sequencing data Seq. ID Files Derived from Mapped genome Command Freeze version Comments STRT2_FP4_6  STRT2_FP4_6_canine_mapped.bam STRT2_FP4_6_canine_mapped.fq.gz CanFam3.1 — 3.0 — STRT2_FP4_6  STRT2_FP4_6_canine_mapped.fq.gz — CanFam3.1 — 3.0 —   Sequencing quality data Other ID Pool name BC reads Spike-in mapped reads Spike-in mapped % Canine mapped reads Canine mapped % Unmapped reads % Comments STRT2_FP4_6 — — 58,469 — 49,654 36.40 — —